comamonas strains Search Results


comamonas sp. strain ncimb 9872  (NCIMB Ltd)
90
NCIMB Ltd comamonas sp. strain ncimb 9872
Comamonas Sp. Strain Ncimb 9872, supplied by NCIMB Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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comamonas jiangduensis strain yw1t  (China Center for Type Culture Collection)
90
China Center for Type Culture Collection comamonas jiangduensis strain yw1t
Comamonas Jiangduensis Strain Yw1t, supplied by China Center for Type Culture Collection, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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draft genome sequence of comamonas jiangduensis strain yw1 t  (China Center for Type Culture Collection)
90
China Center for Type Culture Collection draft genome sequence of comamonas jiangduensis strain yw1 t
Draft Genome Sequence Of Comamonas Jiangduensis Strain Yw1 T, supplied by China Center for Type Culture Collection, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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comamonas jiangduensis strain yw1 t  (China Center for Type Culture Collection)
90
China Center for Type Culture Collection comamonas jiangduensis strain yw1 t
Comamonas Jiangduensis Strain Yw1 T, supplied by China Center for Type Culture Collection, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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comamonas sp. strain ncimb 9872 gene products or orfs  (NCIMB Ltd)
90
NCIMB Ltd comamonas sp. strain ncimb 9872 gene products or orfs
(A) Physical map of the cpn gene cluster <t>in</t> <t>Comamonas</t> sp. strain NCIMB 9872 and subclones in the 16,058-bp region. The orientation of the arrows indicates the direction of gene transcription. The black arrows are genes involved in cyclopentanol degradation. cpnR is a putative regulatory gene. Other <t>ORFs</t> are marked by open arrows. An arrowhead in the cpnB gene indicates the point of insertion of a lacZ-Kmr cassette at the NsiI site resulting in a mutant strain designated 9872MB. Probes 1 and 2 are PCR or restriction fragments used in hybridization experiments. (B) Gene organization of the cyclohexanol degradation (chn) pathway in Acinetobacter sp. strain 9871 (33). The chnABCDE genes (black arrows) encode cyclohexanol dehydrogenase, CHMO, caprolactone hydrolase, 6-hydroxyhexanoate dehydrogenase, and 6-oxohexanoate dehydrogenase, respectively; chnR is an AraC/XylS-type regulator (32, 33); orf5 is an equivalent of orf6 in the cpn pathway; orf3 encodes a potential pilin gene inverting protein; orf8 and -9 are putative transposases A and B, respectively (33). The chn gene cluster as shown is different from that present in strain SE19 (19) with the absence of “chnZ” in between chnR and orf3 (chnY designation in 19), and there are no equivalents of orf8 and -9 in the latter strain.
Comamonas Sp. Strain Ncimb 9872 Gene Products Or Orfs, supplied by NCIMB Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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comamonas sp. strain nyz500  (China Center for Type Culture Collection)
90
China Center for Type Culture Collection comamonas sp. strain nyz500
(A) Physical map of the cpn gene cluster <t>in</t> <t>Comamonas</t> sp. strain NCIMB 9872 and subclones in the 16,058-bp region. The orientation of the arrows indicates the direction of gene transcription. The black arrows are genes involved in cyclopentanol degradation. cpnR is a putative regulatory gene. Other <t>ORFs</t> are marked by open arrows. An arrowhead in the cpnB gene indicates the point of insertion of a lacZ-Kmr cassette at the NsiI site resulting in a mutant strain designated 9872MB. Probes 1 and 2 are PCR or restriction fragments used in hybridization experiments. (B) Gene organization of the cyclohexanol degradation (chn) pathway in Acinetobacter sp. strain 9871 (33). The chnABCDE genes (black arrows) encode cyclohexanol dehydrogenase, CHMO, caprolactone hydrolase, 6-hydroxyhexanoate dehydrogenase, and 6-oxohexanoate dehydrogenase, respectively; chnR is an AraC/XylS-type regulator (32, 33); orf5 is an equivalent of orf6 in the cpn pathway; orf3 encodes a potential pilin gene inverting protein; orf8 and -9 are putative transposases A and B, respectively (33). The chn gene cluster as shown is different from that present in strain SE19 (19) with the absence of “chnZ” in between chnR and orf3 (chnY designation in 19), and there are no equivalents of orf8 and -9 in the latter strain.
Comamonas Sp. Strain Nyz500, supplied by China Center for Type Culture Collection, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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partial tauy in comamonas sp. strain sfcd1  (NCIMB Ltd)
90
NCIMB Ltd partial tauy in comamonas sp. strain sfcd1
(A) Physical map of the cpn gene cluster <t>in</t> <t>Comamonas</t> sp. strain NCIMB 9872 and subclones in the 16,058-bp region. The orientation of the arrows indicates the direction of gene transcription. The black arrows are genes involved in cyclopentanol degradation. cpnR is a putative regulatory gene. Other <t>ORFs</t> are marked by open arrows. An arrowhead in the cpnB gene indicates the point of insertion of a lacZ-Kmr cassette at the NsiI site resulting in a mutant strain designated 9872MB. Probes 1 and 2 are PCR or restriction fragments used in hybridization experiments. (B) Gene organization of the cyclohexanol degradation (chn) pathway in Acinetobacter sp. strain 9871 (33). The chnABCDE genes (black arrows) encode cyclohexanol dehydrogenase, CHMO, caprolactone hydrolase, 6-hydroxyhexanoate dehydrogenase, and 6-oxohexanoate dehydrogenase, respectively; chnR is an AraC/XylS-type regulator (32, 33); orf5 is an equivalent of orf6 in the cpn pathway; orf3 encodes a potential pilin gene inverting protein; orf8 and -9 are putative transposases A and B, respectively (33). The chn gene cluster as shown is different from that present in strain SE19 (19) with the absence of “chnZ” in between chnR and orf3 (chnY designation in 19), and there are no equivalents of orf8 and -9 in the latter strain.
Partial Tauy In Comamonas Sp. Strain Sfcd1, supplied by NCIMB Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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homology model of cyclopentanone monooxygenase from comamonas sp. strain ncimb 9872  (NCIMB Ltd)
90
NCIMB Ltd homology model of cyclopentanone monooxygenase from comamonas sp. strain ncimb 9872
(A) Physical map of the cpn gene cluster <t>in</t> <t>Comamonas</t> sp. strain NCIMB 9872 and subclones in the 16,058-bp region. The orientation of the arrows indicates the direction of gene transcription. The black arrows are genes involved in cyclopentanol degradation. cpnR is a putative regulatory gene. Other <t>ORFs</t> are marked by open arrows. An arrowhead in the cpnB gene indicates the point of insertion of a lacZ-Kmr cassette at the NsiI site resulting in a mutant strain designated 9872MB. Probes 1 and 2 are PCR or restriction fragments used in hybridization experiments. (B) Gene organization of the cyclohexanol degradation (chn) pathway in Acinetobacter sp. strain 9871 (33). The chnABCDE genes (black arrows) encode cyclohexanol dehydrogenase, CHMO, caprolactone hydrolase, 6-hydroxyhexanoate dehydrogenase, and 6-oxohexanoate dehydrogenase, respectively; chnR is an AraC/XylS-type regulator (32, 33); orf5 is an equivalent of orf6 in the cpn pathway; orf3 encodes a potential pilin gene inverting protein; orf8 and -9 are putative transposases A and B, respectively (33). The chn gene cluster as shown is different from that present in strain SE19 (19) with the absence of “chnZ” in between chnR and orf3 (chnY designation in 19), and there are no equivalents of orf8 and -9 in the latter strain.
Homology Model Of Cyclopentanone Monooxygenase From Comamonas Sp. Strain Ncimb 9872, supplied by NCIMB Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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comamonas testosteroni (p. dacunhae) strain  (Mitsubishi Chemical Co Ltd)
90
Mitsubishi Chemical Co Ltd comamonas testosteroni (p. dacunhae) strain
(A) Physical map of the cpn gene cluster <t>in</t> <t>Comamonas</t> sp. strain NCIMB 9872 and subclones in the 16,058-bp region. The orientation of the arrows indicates the direction of gene transcription. The black arrows are genes involved in cyclopentanol degradation. cpnR is a putative regulatory gene. Other <t>ORFs</t> are marked by open arrows. An arrowhead in the cpnB gene indicates the point of insertion of a lacZ-Kmr cassette at the NsiI site resulting in a mutant strain designated 9872MB. Probes 1 and 2 are PCR or restriction fragments used in hybridization experiments. (B) Gene organization of the cyclohexanol degradation (chn) pathway in Acinetobacter sp. strain 9871 (33). The chnABCDE genes (black arrows) encode cyclohexanol dehydrogenase, CHMO, caprolactone hydrolase, 6-hydroxyhexanoate dehydrogenase, and 6-oxohexanoate dehydrogenase, respectively; chnR is an AraC/XylS-type regulator (32, 33); orf5 is an equivalent of orf6 in the cpn pathway; orf3 encodes a potential pilin gene inverting protein; orf8 and -9 are putative transposases A and B, respectively (33). The chn gene cluster as shown is different from that present in strain SE19 (19) with the absence of “chnZ” in between chnR and orf3 (chnY designation in 19), and there are no equivalents of orf8 and -9 in the latter strain.
Comamonas Testosteroni (P. Dacunhae) Strain, supplied by Mitsubishi Chemical Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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genomic dna from comamonas testosteroni strain js42  (ATCC)
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Genomic DNA isolated from Comamonas testosteroni. This bacterial strain is also available as ATCC® Catalog No. 700441™.
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Image Search Results


(A) Physical map of the cpn gene cluster in Comamonas sp. strain NCIMB 9872 and subclones in the 16,058-bp region. The orientation of the arrows indicates the direction of gene transcription. The black arrows are genes involved in cyclopentanol degradation. cpnR is a putative regulatory gene. Other ORFs are marked by open arrows. An arrowhead in the cpnB gene indicates the point of insertion of a lacZ-Kmr cassette at the NsiI site resulting in a mutant strain designated 9872MB. Probes 1 and 2 are PCR or restriction fragments used in hybridization experiments. (B) Gene organization of the cyclohexanol degradation (chn) pathway in Acinetobacter sp. strain 9871 (33). The chnABCDE genes (black arrows) encode cyclohexanol dehydrogenase, CHMO, caprolactone hydrolase, 6-hydroxyhexanoate dehydrogenase, and 6-oxohexanoate dehydrogenase, respectively; chnR is an AraC/XylS-type regulator (32, 33); orf5 is an equivalent of orf6 in the cpn pathway; orf3 encodes a potential pilin gene inverting protein; orf8 and -9 are putative transposases A and B, respectively (33). The chn gene cluster as shown is different from that present in strain SE19 (19) with the absence of “chnZ” in between chnR and orf3 (chnY designation in 19), and there are no equivalents of orf8 and -9 in the latter strain.

Journal: Applied and Environmental Microbiology

Article Title: Cloning and Characterization of a Gene Cluster Involved in Cyclopentanol Metabolism in Comamonas sp. Strain NCIMB 9872 and Biotransformations Effected by Escherichia coli -Expressed Cyclopentanone 1,2-Monooxygenase †

doi: 10.1128/AEM.68.11.5671-5684.2002

Figure Lengend Snippet: (A) Physical map of the cpn gene cluster in Comamonas sp. strain NCIMB 9872 and subclones in the 16,058-bp region. The orientation of the arrows indicates the direction of gene transcription. The black arrows are genes involved in cyclopentanol degradation. cpnR is a putative regulatory gene. Other ORFs are marked by open arrows. An arrowhead in the cpnB gene indicates the point of insertion of a lacZ-Kmr cassette at the NsiI site resulting in a mutant strain designated 9872MB. Probes 1 and 2 are PCR or restriction fragments used in hybridization experiments. (B) Gene organization of the cyclohexanol degradation (chn) pathway in Acinetobacter sp. strain 9871 (33). The chnABCDE genes (black arrows) encode cyclohexanol dehydrogenase, CHMO, caprolactone hydrolase, 6-hydroxyhexanoate dehydrogenase, and 6-oxohexanoate dehydrogenase, respectively; chnR is an AraC/XylS-type regulator (32, 33); orf5 is an equivalent of orf6 in the cpn pathway; orf3 encodes a potential pilin gene inverting protein; orf8 and -9 are putative transposases A and B, respectively (33). The chn gene cluster as shown is different from that present in strain SE19 (19) with the absence of “chnZ” in between chnR and orf3 (chnY designation in 19), and there are no equivalents of orf8 and -9 in the latter strain.

Article Snippet: Homology of the Comamonas sp. strain NCIMB 9872 gene products or ORFs Localization of cpnB and characteristics of downstream sequences.

Techniques: Mutagenesis, Hybridization